Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0E7_TETNGCWC22 spliceosome associated protein homolog. (793 aa)    
Predicted Functional Partners:
H3C767_TETNG
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.998
H3CUD0_TETNG
SLU7 homolog, splicing factor.
   
 0.998
H3D3X4_TETNG
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.997
Q4RUH4_TETNG
Chromosome 1 SCAF14995, whole genome shotgun sequence.
    
  0.997
H3D9G2_TETNG
CWC25 spliceosome associated protein homolog.
   
 0.996
H3DB50_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.995
H3DD02_TETNG
Cactin.
    
 0.992
H3DM28_TETNG
Coiled-coil domain containing 12.
    
  0.991
H3CB69_TETNG
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
 0.990
H3CNE9_TETNG
Uncharacterized protein.
   
 0.989
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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