STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0F4_TETNGB30.2/SPRY domain-containing protein. (218 aa)    
Predicted Functional Partners:
H3DDS2_TETNG
UBA domain containing 1.
   
 
 0.930
H3BXI0_TETNG
Ubiquitin carboxyl-terminal hydrolase.
   
 0.769
H3CH94_TETNG
Ubiquitin specific peptidase 19.
   
 0.769
H3D7B1_TETNG
Ankyrin repeat and SOCS box containing 6.
    
 
 0.580
H3D0D4_TETNG
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
    
 
 0.573
H3CV71_TETNG
Transcription factor 25 (basic helix-loop-helix).
      
 0.556
H3DEF8_TETNG
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.546
USP15
Ubiquitin carboxyl-terminal hydrolase.
   
 0.538
H3DAV3_TETNG
Ubiquitin carboxyl-terminal hydrolase.
   
 0.538
H3CEB1_TETNG
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.530
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.