Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0G0_TETNGISY1 splicing factor homolog. (276 aa)    
Predicted Functional Partners:
H3CL91_TETNG
BUD31 homolog.
   
 0.998
H3CNE9_TETNG
Uncharacterized protein.
    
 0.998
H3CZE3_TETNG
Crooked neck pre-mRNA splicing factor 1.
   
 0.998
H3D9P1_TETNG
Pre-mRNA processing factor 19.
    
 0.997
H3D9Q4_TETNG
Uncharacterized protein.
   
 0.997
H3DIN0_TETNG
Aquarius intron-binding spliceosomal factor.
    
 0.997
H3DHM5_TETNG
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
  0.995
ZNF830
Zinc finger protein 830.
    
  0.992
H3CWE6_TETNG
SNW domain containing 1.
    
 0.989
H3D3X4_TETNG
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.983
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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