STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0H0_TETNGUncharacterized protein. (64 aa)    
Predicted Functional Partners:
Q4SK90_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
   
 0.765
H3DLG9_TETNG
AF4/FMR2 family, member 4.
    
 0.765
H3CQ12_TETNG
Uncharacterized protein.
    
 0.751
Q4S464_TETNG
Chromosome undetermined SCAF14743, whole genome shotgun sequence.
   
 0.743
H3D509_TETNG
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.731
H3DDK9_TETNG
DNA methyltransferase 1 associated protein 1.
   
 0.719
H3DE37_TETNG
ELL associated factor 2.
   
 0.711
Q4TAB3_TETNG
Chromosome undetermined SCAF7390, whole genome shotgun sequence.
   
 0.701
H3CA73_TETNG
AT rich interactive domain 4A (RBP1-like).
    
 0.699
H3DGW8_TETNG
Translocase of outer mitochondrial membrane 20.
    
 0.699
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.