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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0H5_TETNGUncharacterized protein. (151 aa)    
Predicted Functional Partners:
H3CWV8_TETNG
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.797
H3CGE8_TETNG
RNA binding motif protein 25a.
   
 0.643
H3D3V0_TETNG
RNA binding motif protein 25b.
   
 0.643
H3DHN3_TETNG
Serine/arginine repetitive matrix 1.
   
 0.642
BANF1
Barrier to autointegration factor 1.
   
 0.633
Q4SCQ3_TETNG
Chromosome undetermined SCAF2949, whole genome shotgun sequence.
   
 0.633
Q4S2N2_TETNG
Chromosome 17 SCAF14760, whole genome shotgun sequence.
   
 0.633
H3CGW0_TETNG
Mothers against decapentaplegic homolog.
    
 
 0.601
H3CSN4_TETNG
Mothers against decapentaplegic homolog.
    
 
 0.601
SMAD3
Mothers against decapentaplegic homolog.
    
 
 0.601
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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