Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0L7_TETNGSPARC (osteonectin), cwcv and kazal like domains proteoglycan 1. (366 aa)    
Predicted Functional Partners:
H3D5Z2_TETNG
Secreted protein, acidic, cysteine-rich (osteonectin).
   
  
 0.573
H3C979_TETNG
TIMP metallopeptidase inhibitor 2a.
     
  0.525
H3CWM8_TETNG
TIMP metallopeptidase inhibitor 2b.
     
  0.525
H3CR71_TETNG
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.516
H3CXP1_TETNG
Matrix metallopeptidase 15b.
    
 0.516
H3BZX8_TETNG
Family with sequence similarity 222 member A.
      
 0.472
H3CVB6_TETNG
Uncharacterized protein.
     
 0.469
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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