Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0L9_TETNGHECT domain-containing protein. (1022 aa)    
Predicted Functional Partners:
H3D7P2_TETNG
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.679
H3DIV0_TETNG
Radical S-adenosyl methionine domain containing 2.
   
 
 0.628
H3CGU7_TETNG
HECT domain-containing protein.
   
 
 0.596
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
 0.569
UBE2L3
Chromosome undetermined SCAF14638, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.560
MX1
MX dynamin like GTPase 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.539
H3DEM0_TETNG
ISG15 ubiquitin like modifier.
   
 0.537
H3DCK5_TETNG
Interferon regulatory factor 3.
   
 0.536
Q4TIP0_TETNG
Chromosome undetermined SCAF1923, whole genome shotgun sequence.
    
 
 0.519
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.512
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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