Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0M0_TETNGUncharacterized protein. (2153 aa)    
Predicted Functional Partners:
H3DQ77_TETNG
Ectodysplasin A receptor.
      
 0.533
H3CUH6_TETNG
Uncharacterized protein.
      
 0.509
H3D5E4_TETNG
Zic family member 4.
      
 0.509
H3D5E3_TETNG
Zic family member 1 (odd-paired homolog, Drosophila).
      
 0.508
Q4RF48_TETNG
Chromosome 14 SCAF15120, whole genome shotgun sequence.
      
 0.495
H3D0E5_TETNG
Polycystic kidney disease 2.
      
 0.492
H3D6D3_TETNG
Polycystic kidney disease 2-like 1.
      
 0.492
H3CD08_TETNG
Si:ch211-1o7.3.
      
 0.430
H3C4U4_TETNG
Matrix metallopeptidase 19.
      
 0.426
H3CYD7_TETNG
Matrix metallopeptidase 21.
      
 0.426
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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