Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0Q1_TETNGUncharacterized protein. (1008 aa)    
Predicted Functional Partners:
H3BWC4_TETNG
Contactin associated protein like 2b.
   
 0.479
H3C339_TETNG
Contactin associated protein-like 5a.
   
 0.479
H3CKN1_TETNG
Uncharacterized protein.
   
 0.479
H3CMS5_TETNG
Uncharacterized protein.
   
 0.479
H3CRA1_TETNG
Contactin associated protein like 3.
   
 0.479
CNTNAP2
Contactin associated protein like 2.
   
 0.479
H3D2A6_TETNG
Contactin associated protein 1.
   
 0.479
H3C0W4_TETNG
Uncharacterized protein.
   
 0.470
H3C819_TETNG
Uncharacterized protein.
   
 0.470
H3C985_TETNG
Bravo_FIGEY domain-containing protein.
   
 0.470
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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