Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM124AFamily with sequence similarity 124 member A. (423 aa)    
Predicted Functional Partners:
H3C312_TETNG
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 
 0.771
H3CSK7_TETNG
TBC1 domain family, member 2B.
      
 0.754
H3CII1_TETNG
Neuralized E3 ubiquitin protein ligase 4.
      
 0.621
H3CKW1_TETNG
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
      
 0.615
H3DCS6_TETNG
Serine--pyruvate aminotransferase.
   
  
 0.579
H3DII8_TETNG
Programmed cell death 10b.
      
 0.572
H3D7C0_TETNG
Uncharacterized protein; Belongs to the peptidase S1 family.
  
 0.554
Q4RG83_TETNG
Chromosome 2 SCAF15106, whole genome shotgun sequence.
  
 0.554
H3DNH7_TETNG
Hyaluronan binding protein 2.
  
 0.554
H3D7C2_TETNG
Family with sequence similarity 160 member B1.
      
 0.546
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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