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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0V3_TETNGReceptor-associated protein of the synapse, 43kD. (350 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
   
  
 0.556
H3CUA3_TETNG
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.530
H3D724_TETNG
Uncharacterized protein.
      
 0.530
H3D9I3_TETNG
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.530
Q4RCR4_TETNG
Chromosome undetermined SCAF18230, whole genome shotgun sequence.
      
 0.530
H3CIG7_TETNG
Cholinergic receptor, nicotinic, delta (muscle).
   
 
 0.426
Q4S8X9_TETNG
Chromosome 7 SCAF14703, whole genome shotgun sequence.
   
 
 0.417
H3DCW0_TETNG
Cholinergic receptor, nicotinic, gamma.
   
 
 0.403
H3CK45_TETNG
Cholinergic receptor, nicotinic, beta 1 (muscle).
   
 
 0.401
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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