Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3C0W7_TETNGLAM_G_DOMAIN domain-containing protein. (1375 aa)    
Predicted Functional Partners:
H3DCD6_TETNG
Matrix metallopeptidase 9.
   
 0.582
H3CZ10_TETNG
RRM domain-containing protein.
    
 0.516
H3C6N6_TETNG
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.462
H3CFJ4_TETNG
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.462
H3D4R0_TETNG
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
    
 0.462
H3DPZ3_TETNG
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.462
H3CQX5_TETNG
RRM domain-containing protein.
    
 
 0.459
H3D3R2_TETNG
Nucleolin.
    
 
 0.459
H3CYY3_TETNG
Eukaryotic translation initiation factor 2-alpha kinase 3.
      
 0.456
H3CNX2_TETNG
Down-regulator of transcription 1.
      
 0.443
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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