Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C0W8_TETNGPOC1 centriolar protein B. (495 aa)    
Predicted Functional Partners:
H3D7U8_TETNG
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.848
H3CZR1_TETNG
KAT8 regulatory NSL complex subunit 3.
    
 0.712
H3CK30_TETNG
WD_REPEATS_REGION domain-containing protein.
   
 0.709
H3DRC8_TETNG
Retinoblastoma binding protein 5.
   
 0.709
H3D1H5_TETNG
WASH complex subunit 3.
    
   0.700
H3CFQ7_TETNG
KAT8 regulatory NSL complex subunit 2.
    
 0.696
H3BYU8_TETNG
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.682
H3DBT3_TETNG
SET domain containing 1A, histone lysine methyltransferase.
   
 0.682
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.673
H3DB11_TETNG
WD_REPEATS_REGION domain-containing protein.
   
 0.671
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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