Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C0X3_TETNGATP-binding cassette, sub-family A (ABC1), member 1A. (2269 aa)    
Predicted Functional Partners:
H3D5R2_TETNG
Rac family small GTPase 1a.
    
 0.909
H3DNA6_TETNG
Uncharacterized protein.
    
 0.909
H3CMM1_TETNG
Zgc:172302.
  
  
 
0.902
H3CW30_TETNG
Nuclear receptor subfamily 1, group H, member 3.
    
 0.790
H3CLP6_TETNG
Apolipoprotein A-IV b, tandem duplicate 2.
    
 0.723
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
      
 0.584
Q4SQY7_TETNG
Chromosome 11 SCAF14528, whole genome shotgun sequence.
    
 
 0.521
H3D4S9_TETNG
Uncharacterized protein.
    
 
 0.521
H3CD45_TETNG
SUN domain-containing protein.
    
 
 0.508
H3DKT7_TETNG
Sad1 and UNC84 domain containing 1.
    
 
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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