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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0Z2_TETNGHaloacid dehalogenase-like hydrolase domain containing 3. (241 aa)    
Predicted Functional Partners:
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
  
 
 0.876
Q4RSM0_TETNG
Chromosome 12 SCAF14999, whole genome shotgun sequence.
  
 
 0.704
H3DEU9_TETNG
Aminotran_5 domain-containing protein.
  
 
 0.704
H3DL37_TETNG
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.700
H3DH57_TETNG
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 
 0.667
H3DMG7_TETNG
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
   
 
 0.656
H3DKM8_TETNG
8-oxoguanine DNA glycosylase.
    
  0.592
H3CL90_TETNG
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.586
H3CNM2_TETNG
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.586
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.586
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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