Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C0Z4_TETNGNuclear transcription factor, X-box binding-like 1. (831 aa)    
Predicted Functional Partners:
H3DF42_TETNG
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
   
    0.683
H3DQW1_TETNG
Uncharacterized protein.
   
    0.683
H3CPX6_TETNG
Ribosomal protein L7a.
   
 
 0.663
H3CJS9_TETNG
Uncharacterized protein.
    
   0.647
Q4SJL7_TETNG
Chromosome 4 SCAF14575, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL22 family.
    
   0.640
Q4RMB7_TETNG
Chromosome 10 SCAF15019, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL13 family.
    
   0.640
RPS3
KH type-2 domain-containing protein.
    
   0.633
Q4SZQ5_TETNG
Peptidylprolyl isomerase.
   
   0.626
Q4SH08_TETNG
Peptidylprolyl isomerase.
   
   0.626
H3D074_TETNG
Peptidylprolyl isomerase.
   
   0.626
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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