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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C0Z4_TETNGNuclear transcription factor, X-box binding-like 1. (831 aa)    
Predicted Functional Partners:
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.840
Q4RR83_TETNG
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.721
H3DF42_TETNG
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
   
    0.664
H3DQW1_TETNG
Uncharacterized protein.
   
    0.664
Q4T9W7_TETNG
Chromosome undetermined SCAF7485, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.
    
   0.629
H3CJS9_TETNG
Uncharacterized protein.
    
   0.629
H3D0G4_TETNG
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.629
H3DKX6_TETNG
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.629
Q4T4Z2_TETNG
Chromosome undetermined SCAF9489, whole genome shotgun sequence.
   
    0.600
Q4SRJ0_TETNG
Chromosome undetermined SCAF14526, whole genome shotgun sequence.
   
    0.600
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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