Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C105_TETNGDeoxyribonuclease I. (192 aa)    
Predicted Functional Partners:
H3CWV0_TETNG
Uncharacterized protein.
    
   0.606
H3CD94_TETNG
PHD finger protein 13.
    
   0.598
H3DPN6_TETNG
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.598
H3CHU8_TETNG
T-box transcription factor 20.
    
   0.566
PLA2G1B
Phospholipase A(2).
   
    0.554
PRR5
Proline rich 5.
      
 0.499
H3CSZ7_TETNG
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.465
Q4RE77_TETNG
Chromosome 2 SCAF15135, whole genome shotgun sequence.
      
 0.465
H3BXQ7_TETNG
Signal peptidase complex subunit 2.
    
 
 0.457
Q4SRD1_TETNG
Chromosome 11 SCAF14528, whole genome shotgun sequence.
    
   0.439
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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