Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3C113_TETNGTNFR-Cys domain-containing protein. (403 aa)    
Predicted Functional Partners:
Q4S9Q4_TETNG
Chromosome 2 SCAF14695, whole genome shotgun sequence; Belongs to the tumor necrosis factor family.
    
 0.997
Q4S7S5_TETNG
Chromosome 18 SCAF14712, whole genome shotgun sequence.
   
  
 0.778
H3BVM7_TETNG
CD40 ligand; Belongs to the tumor necrosis factor family.
    
 0.711
H3CTM1_TETNG
Neutrophil cytosolic factor 2.
      
 0.676
H3CB75_TETNG
Nuclear factor of activated T cells 1.
      
 0.655
H3D9C1_TETNG
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.643
H3C0Z1_TETNG
TNF_2 domain-containing protein.
   
 0.641
H3CT77_TETNG
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.614
H3CW38_TETNG
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.597
H3CEB3_TETNG
Growth factor receptor-bound protein 2b.
   
 
 0.538
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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