STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMOXSpermine oxidase. (545 aa)    
Predicted Functional Partners:
H3CG33_TETNG
Spermidine/spermine N1-acetyltransferase 1b.
      
 0.755
H3D3X6_TETNG
Solute carrier family 22 member 16.
     
 0.745
Q4RVM5_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence; Belongs to the spermidine/spermine synthase family.
      
 0.730
H3CXC2_TETNG
Spermine synthase.
      
 0.729
H3C894_TETNG
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
  
 0.694
H3CAN8_TETNG
Adenosylmethionine decarboxylase 1.
      
 0.686
H3CAN9_TETNG
S-adenosylmethionine decarboxylase proenzyme.
      
 0.686
Q4RQE0_TETNG
Chromosome 17 SCAF15006, whole genome shotgun sequence.
      
 0.680
H3DL92_TETNG
Prostaglandin-endoperoxide synthase 2b.
      
 0.664
Q4SV04_TETNG
Chromosome undetermined SCAF13832, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.648
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.