MPZL2 protein (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MPZL2

Myelin protein zero like 2. (201 aa)

Predicted Functional Partners:

MPZL3

0.821

H3CCW5_TETNG

0.771

H3D8X1_TETNG

0.736

H3CM87_TETNG

0.686

H3CPV4_TETNG

0.620

H3CQR5_TETNG

0.524

H3C7L7_TETNG

0.509

H3CWB2_TETNG

0.509

H3D2U5_TETNG

0.509

H3D955_TETNG

0.509

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3C7L7_TETNG	H3CCW5_TETNG	ENSTNIP00000004239	ENSTNIP00000006088	Uncharacterized protein.	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.509
H3C7L7_TETNG	H3D8X1_TETNG	ENSTNIP00000004239	ENSTNIP00000016962	Uncharacterized protein.	Motile sperm domain containing 2.	0.472
H3C7L7_TETNG	MPZL2	ENSTNIP00000004239	ENSTNIP00000001946	Uncharacterized protein.	Myelin protein zero like 2.	0.509
H3CCW5_TETNG	H3C7L7_TETNG	ENSTNIP00000006088	ENSTNIP00000004239	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	Uncharacterized protein.	0.509
H3CCW5_TETNG	H3CWB2_TETNG	ENSTNIP00000006088	ENSTNIP00000012546	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	Serine incorporator 2, like.	0.509
H3CCW5_TETNG	H3D8X1_TETNG	ENSTNIP00000006088	ENSTNIP00000016962	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	Motile sperm domain containing 2.	0.763
H3CCW5_TETNG	H3D955_TETNG	ENSTNIP00000006088	ENSTNIP00000017046	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	Serine incorporator 2.	0.509
H3CCW5_TETNG	MPZL2	ENSTNIP00000006088	ENSTNIP00000001946	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	Myelin protein zero like 2.	0.771
H3CM87_TETNG	MPZL2	ENSTNIP00000009368	ENSTNIP00000001946	Cellular repressor of E1A-stimulated genes 1; Belongs to the CREG family.	Myelin protein zero like 2.	0.686
H3CPV4_TETNG	MPZL2	ENSTNIP00000010288	ENSTNIP00000001946	Transmembrane protein 26a.	Myelin protein zero like 2.	0.620
H3CQR5_TETNG	MPZL2	ENSTNIP00000010599	ENSTNIP00000001946	Sodium channel, voltage-gated, type III, beta.	Myelin protein zero like 2.	0.524
H3CQR5_TETNG	MPZL3	ENSTNIP00000010599	ENSTNIP00000000276	Sodium channel, voltage-gated, type III, beta.	Myelin protein zero like 3.	0.425
H3CWB2_TETNG	H3CCW5_TETNG	ENSTNIP00000012546	ENSTNIP00000006088	Serine incorporator 2, like.	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.509
H3CWB2_TETNG	H3D8X1_TETNG	ENSTNIP00000012546	ENSTNIP00000016962	Serine incorporator 2, like.	Motile sperm domain containing 2.	0.472
H3CWB2_TETNG	MPZL2	ENSTNIP00000012546	ENSTNIP00000001946	Serine incorporator 2, like.	Myelin protein zero like 2.	0.509
H3D2U5_TETNG	MPZL2	ENSTNIP00000014833	ENSTNIP00000001946	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Myelin protein zero like 2.	0.509
H3D8X1_TETNG	H3C7L7_TETNG	ENSTNIP00000016962	ENSTNIP00000004239	Motile sperm domain containing 2.	Uncharacterized protein.	0.472
H3D8X1_TETNG	H3CCW5_TETNG	ENSTNIP00000016962	ENSTNIP00000006088	Motile sperm domain containing 2.	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.763
H3D8X1_TETNG	H3CWB2_TETNG	ENSTNIP00000016962	ENSTNIP00000012546	Motile sperm domain containing 2.	Serine incorporator 2, like.	0.472
H3D8X1_TETNG	H3D955_TETNG	ENSTNIP00000016962	ENSTNIP00000017046	Motile sperm domain containing 2.	Serine incorporator 2.	0.472