Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C132_TETNGProtein tyrosine phosphatase receptor type K. (1444 aa)    
Predicted Functional Partners:
H3D0X7_TETNG
Uncharacterized protein.
    
 0.491
H3CEB3_TETNG
Growth factor receptor-bound protein 2b.
    
 0.484
H3C0Q9_TETNG
Uncharacterized protein.
    
 0.423
H3CGN0_TETNG
PTPRF interacting protein alpha 1.
    
 0.423
H3CKY0_TETNG
PTPRF interacting protein alpha 3.
    
 0.423
H3CPA0_TETNG
PTPRF interacting protein alpha 4.
    
 0.423
H3D1G3_TETNG
PTPRF interacting protein alpha 2.
    
 0.423
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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