Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C143_TETNGUncharacterized protein. (69 aa)    
Predicted Functional Partners:
H3CKG5_TETNG
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
   0.938
H3BWW5_TETNG
Uncharacterized protein.
      
 0.686
Q4T0T9_TETNG
Chromosome undetermined SCAF10850, whole genome shotgun sequence.
   
  
 0.672
H3CSP8_TETNG
Sorting nexin 22.
    
 
 0.553
H3CSB2_TETNG
Angio-associated, migratory cell protein.
      
 0.438
H3D8H5_TETNG
Spondin 1a.
      
 0.436
H3D8L5_TETNG
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
      
 0.435
H3CI28_TETNG
Tudor domain containing 3.
    
   0.423
H3D3U6_TETNG
Secretogranin V.
      
 0.420
H3DQY0_TETNG
G protein-coupled receptor 174.
      
 0.410
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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