Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C144_TETNGMyogenic factor. (307 aa)    
Predicted Functional Partners:
H3C5X3_TETNG
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.824
H3CFM3_TETNG
Transcription factor 3b.
    
 0.757
H3CVA9_TETNG
Transcription factor 12.
    
 0.757
TCF4
Transcription factor 4.
    
 0.757
H3DCZ2_TETNG
Transcription factor 3a.
    
 0.757
H3CL95_TETNG
E1A binding protein p300 b.
    
 
 0.688
H3D5Y4_TETNG
E1A binding protein p300 a.
    
 
 0.688
H3CNJ7_TETNG
CREB binding protein b.
    
 
 0.655
H3D9B5_TETNG
CREB binding protein a.
    
 
 0.655
H3D864_TETNG
BHLH domain-containing protein.
    
 0.649
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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