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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C144_TETNGMyogenic factor. (307 aa)    
Predicted Functional Partners:
H3CFM3_TETNG
Transcription factor 3b.
    
 0.579
H3CVA9_TETNG
Transcription factor 12.
    
 0.579
TCF4
Transcription factor 4.
    
 0.579
H3DCZ2_TETNG
Transcription factor 3a.
    
 0.579
H3D864_TETNG
BHLH domain-containing protein.
    
 0.575
H3CP99_TETNG
Myogenin.
  
 
0.572
Q4S3B9_TETNG
Chromosome 1 SCAF14751, whole genome shotgun sequence.
    
 0.554
H3C5X3_TETNG
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.509
H3D9Y8_TETNG
Paired box 3b.
   
 
 0.503
Q4RX42_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence.
   
 
 0.500
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.