Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C161_TETNGSema domain-containing protein; Belongs to the semaphorin family. (794 aa)    
Predicted Functional Partners:
H3DK99_TETNG
Transmembrane protein 64.
      
 0.583
H3CPF5_TETNG
Macrophage stimulating 1 receptor b.
  
 0.559
H3BZJ1_TETNG
Plexin_cytopl domain-containing protein.
    
 0.482
H3C992_TETNG
Plexin_cytopl domain-containing protein.
    
 0.482
H3CDM3_TETNG
Uncharacterized protein.
    
 0.482
PLXNA1
Plexin A1.
    
 0.482
H3CE63_TETNG
PSI domain-containing protein.
    
 0.482
H3CEU2_TETNG
Plexin A3.
    
 0.482
H3CF33_TETNG
IPT/TIG domain-containing protein.
    
 0.482
H3CFJ7_TETNG
Sema domain-containing protein.
    
 0.482
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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