Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C162_TETNGInfo leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a. (449 aa)    
Predicted Functional Partners:
H3D933_TETNG
TNF receptor-associated factor 7.
    
 0.857
H3D5K7_TETNG
WD repeat domain 90.
    
 0.826
H3CNI8_TETNG
Uncharacterized protein.
    
 0.811
H3CS33_TETNG
G protein-coupled receptor 108.
    
   0.803
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.800
H3DBM8_TETNG
Vav 3 guanine nucleotide exchange factor b.
    
 0.751
H3DNQ3_TETNG
Netrin g1a.
    
 0.751
H3D4J7_TETNG
Uncharacterized protein.
    
 0.741
H3D8L4_TETNG
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.741
H3D8L5_TETNG
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.741
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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