Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C169_TETNGTetratricopeptide repeat domain 21B. (1315 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
   
 0.999
H3CJ78_TETNG
WD repeat domain 19.
   
 0.999
H3CMI1_TETNG
WD repeat-containing protein 35.
   
 0.999
H3D5J8_TETNG
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.999
IFT43
Intraflagellar transport 43.
    
 0.998
H3CQI9_TETNG
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.956
H3CIP1_TETNG
Intraflagellar transport 172.
   
 0.954
H3D1K4_TETNG
Intraflagellar transport 81 homolog.
   
 0.951
H3CAK2_TETNG
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 0.941
H3CM13_TETNG
Intraflagellar transport 57 homolog (Chlamydomonas).
  
 
 0.937
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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