Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C182_TETNGUncharacterized protein. (112 aa)    
Predicted Functional Partners:
H3D713_TETNG
Centrosomal protein 192.
    
 
 0.878
H3C721_TETNG
SRY-box transcription factor 13.
    
   0.831
H3CN94_TETNG
SRY-box transcription factor 5.
    
   0.820
H3CVG8_TETNG
SRY-box transcription factor 6.
    
   0.820
H3CRW5_TETNG
Rotatin.
      
 0.682
H3CME5_TETNG
Coiled-coil domain containing 77.
   
  
 0.597
H3D4R5_TETNG
Nuclear envelope integral membrane protein 1.
      
 0.590
H3DJ05_TETNG
Polo-like kinase 4 (Drosophila).
    
 
 0.581
H3DGY7_TETNG
Zinc finger protein 367.
      
 0.574
H3CQZ9_TETNG
FGGY carbohydrate kinase domain containing.
      
 0.508
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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