STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C191_TETNGZgc:113436. (417 aa)    
Predicted Functional Partners:
H3DIS1_TETNG
Uncharacterized protein.
    
 0.929
lin52
Protein lin-52 homolog.
    
 0.667
H3D7K0_TETNG
Lin-54 DREAM MuvB core complex component.
    
 0.652
H3DJZ7_TETNG
EF-hand calcium binding domain 2.
   
 
 0.623
H3DG38_TETNG
Lin-9 DREAM MuvB core complex component.
    
 0.619
H3DI23_TETNG
PiggyBac transposable element derived 5.
   
 
 0.577
HARBI1
Harbinger transposase derived 1.
      
 0.554
RBBP7
Chromosome undetermined SCAF7762, whole genome shotgun sequence.
    
 0.537
H3DJC1_TETNG
Retinoblastoma binding protein 4.
    
 0.537
H3DJZ4_TETNG
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.491
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.