Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C1J9_TETNGMidline 2. (722 aa)    
Predicted Functional Partners:
Q4RAQ4_TETNG
Chromosome undetermined SCAF23106, whole genome shotgun sequence.
    
 
 0.654
Q4RCG1_TETNG
Chromosome undetermined SCAF19002, whole genome shotgun sequence.
    
 
 0.654
H3D4Q0_TETNG
Ring finger protein 41.
    
 0.591
H3CP27_TETNG
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.563
H3CVS1_TETNG
PEST proteolytic signal containing nuclear protein.
      
 0.449
H3CEY1_TETNG
Retinal degeneration 3, GUCY2D regulator.
      
 0.402
FSD2
Fibronectin type III and SPRY domain containing 2.
      
 0.401
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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