Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3C1K8_TETNGMalate dehydrogenase 1B, NAD (soluble). (444 aa)    
Predicted Functional Partners:
Q4T6G9_TETNG
Chromosome undetermined SCAF8763, whole genome shotgun sequence.
  
 0.950
cs
Citrate synthase, mitochondrial.
  
 0.893
Q4SJ51_TETNG
Chromosome 4 SCAF14575, whole genome shotgun sequence.
   
 
 0.870
H3CV84_TETNG
Aspartate aminotransferase.
   
 0.866
H3D8U5_TETNG
MYCBP-associated, testis expressed 1.
   
   0.842
H3D719_TETNG
Uncharacterized protein.
   
   0.828
H3DEG1_TETNG
WD repeat domain 66.
    
   0.763
H3CWU3_TETNG
Malate dehydrogenase.
  
 
 
0.754
H3CAM1_TETNG
Malate dehydrogenase.
  
 
 
0.749
H3CYT6_TETNG
NME/NM23 family member 5; Belongs to the NDK family.
  
 
 0.749
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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