STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C1M3_TETNGMyotubularin related protein 1a. (665 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.941
H3D1U8_TETNG
Phosphoinositide kinase, FYVE finger containing.
     
 0.934
H3CKU4_TETNG
SAC1 like phosphatidylinositide phosphatase a.
   
 
 0.913
H3CNB1_TETNG
Uncharacterized protein.
     
  0.900
H3CXW1_TETNG
Uncharacterized protein.
     
  0.900
H3D0H0_TETNG
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
     
 0.900
H3D0Y9_TETNG
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.900
Q4RLD1_TETNG
Chromosome 21 SCAF15022, whole genome shotgun sequence.
     
  0.900
H3CKI5_TETNG
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta; Belongs to the PI3/PI4-kinase family.
    
 0.812
H3CB57_TETNG
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
    
 0.704
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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