STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C1N1_TETNGUncharacterized protein. (187 aa)    
Predicted Functional Partners:
H3C3B4_TETNG
Centromere protein N.
   
 0.877
H3DEC4_TETNG
X-linked inhibitor of apoptosis.
   
 0.842
Q4SHZ5_TETNG
Chromosome 5 SCAF14581, whole genome shotgun sequence.
   
 0.835
H3BWS4_TETNG
Proliferation associated nuclear element.
   
 0.825
H3BZB8_TETNG
Centromere protein K.
   
 0.809
H3D0A2_TETNG
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 0.794
H3C3F9_TETNG
Uncharacterized protein.
   
 0.767
H3C6W0_TETNG
Centromere protein I.
   
 0.767
H3CEA9_TETNG
Baculoviral IAP repeat containing 7.
   
 0.748
H3CX98_TETNG
Baculoviral IAP repeat containing 2.
   
 0.748
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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