Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C1N3_TETNGUncharacterized protein. (317 aa)    
Predicted Functional Partners:
H3CLP6_TETNG
Apolipoprotein A-IV b, tandem duplicate 2.
   
 0.993
H3D499_TETNG
Microsomal triglyceride transfer protein.
   
 0.947
H3D442_TETNG
Vitellogenin domain-containing protein.
 
  
  0.936
H3BVN8_TETNG
Uncharacterized protein.
   
 0.927
H3CI38_TETNG
Cholesteryl ester transfer protein, plasma.
   
 
 0.853
H3DA29_TETNG
Apolipoprotein A-Ib.
   
 0.834
H3DD70_TETNG
Valosin containing protein; Belongs to the AAA ATPase family.
    
   0.798
APOH
Apolipoprotein H.
   
 
 0.789
H3CG09_TETNG
Low density lipoprotein receptor b.
    
 0.781
H3C6P0_TETNG
Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]
   
 0.762
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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