Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNM1LDynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (679 aa)    
Predicted Functional Partners:
H3DEV8_TETNG
Cyclin G associated kinase.
   
 0.952
Q4RPI5_TETNG
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.938
H3CS70_TETNG
Mitochondrial elongation factor 2.
    
 
 0.923
H3DFV8_TETNG
Intersectin 2a.
    
 
 0.877
H3DK01_TETNG
Uncharacterized protein.
    
 
 0.877
H3D789_TETNG
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.833
H3D4F5_TETNG
PTEN induced kinase 1.
    
 0.783
H3D886_TETNG
Leucine-rich repeat kinase 2.
    
 0.772
H3DL76_TETNG
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.766
H3C102_TETNG
Intersectin 1 (SH3 domain protein).
    
 
 0.763
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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