Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C1P1_TETNGPeriostin, osteoblast specific factor a. (746 aa)    
Predicted Functional Partners:
H3C1G4_TETNG
Lumican.
   
  
 0.715
H3CR51_TETNG
Collagen, type VI, alpha 1.
   
 
 0.694
H3DFS6_TETNG
Dachsous cadherin-related 1a.
   
  
 0.686
H3DNX5_TETNG
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.686
H3CDX4_TETNG
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
    
 
 0.596
H3C231_TETNG
Atonal bHLH transcription factor 8.
      
 0.589
TIMP3
Chromosome undetermined SCAF14347, whole genome shotgun sequence.
   
  
 0.589
H3BVZ4_TETNG
Vestigial-like family member 3.
      
 0.588
H3D5Z2_TETNG
Secreted protein, acidic, cysteine-rich (osteonectin).
   
 
 0.582
H3CNV5_TETNG
Fibulin 5.
   
  
 0.557
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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