Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C1P5_TETNGUncharacterized protein. (1364 aa)    
Predicted Functional Partners:
H3CL20_TETNG
LRRNT domain-containing protein.
   
 0.680
H3DE53_TETNG
Slit homolog 3 (Drosophila).
   
 0.680
H3C8X9_TETNG
Uncharacterized protein.
   
 0.620
H3CHX4_TETNG
Slit homolog 2 (Drosophila).
   
 0.620
H3CJ24_TETNG
Slit homolog 1a (Drosophila).
   
 0.620
H3DGG6_TETNG
Slit homolog 1b (Drosophila).
   
 0.620
H3D1Y2_TETNG
Nyctalopin.
   
 0.589
H3CUI1_TETNG
Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake.
     
 0.565
Q4SJH9_TETNG
Chromosome 4 SCAF14575, whole genome shotgun sequence.
   
 0.513
H3DDH2_TETNG
Tyrosine-protein kinase.
   
 0.513
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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