Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C1R1_TETNGReticulon. (721 aa)    
Predicted Functional Partners:
H3D656_TETNG
Sorting nexin 15.
    
   0.716
H3DQ52_TETNG
Receptor expression-enhancing protein.
    
 
 0.586
H3DPT7_TETNG
Atlastin GTPase 1.
    
 
 0.581
H3DHD9_TETNG
Atlastin 3.
    
 
 0.543
H3C845_TETNG
Atlastin GTPase 2.
    
 
 0.536
H3DFW2_TETNG
SEC63 homolog, protein translocation regulator.
    
 
 0.529
H3DIH5_TETNG
Receptor expression-enhancing protein.
    
 
 0.482
H3CHR4_TETNG
Leucine rich repeat and Ig domain containing 2a.
    
 0.470
H3CSR1_TETNG
Leucine rich repeat and Ig domain containing 1a.
    
 0.470
H3CW34_TETNG
Leucine rich repeat and Ig domain containing 1b.
    
 0.470
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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