H3C2I4_TETNG protein (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

H3C2I4_TETNG

Signal-induced proliferation-associated 1 like 1. (1854 aa)

Predicted Functional Partners:

H3C9C0_TETNG

0.508

H3C3P5_TETNG

0.504

H3CLX4_TETNG

0.497

H3CNK8_TETNG

0.497

H3D4L1_TETNG

0.497

H3CZW6_TETNG

0.473

H3BZV2_TETNG

0.456

LZTS2-2

0.456

H3C8Z5_TETNG

0.454

H3DPV5_TETNG

0.454

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BZV2_TETNG	H3C2I4_TETNG	ENSTNIP00000001518	ENSTNIP00000002452	Leucine zipper, putative tumor suppressor family member 3b.	Signal-induced proliferation-associated 1 like 1.	0.456
H3C2I4_TETNG	H3BZV2_TETNG	ENSTNIP00000002452	ENSTNIP00000001518	Signal-induced proliferation-associated 1 like 1.	Leucine zipper, putative tumor suppressor family member 3b.	0.456
H3C2I4_TETNG	H3C3P5_TETNG	ENSTNIP00000002452	ENSTNIP00000002864	Signal-induced proliferation-associated 1 like 1.	Regulating synaptic membrane exocytosis 1a.	0.504
H3C2I4_TETNG	H3C8Z5_TETNG	ENSTNIP00000002452	ENSTNIP00000004717	Signal-induced proliferation-associated 1 like 1.	Uncharacterized protein.	0.454
H3C2I4_TETNG	H3C9C0_TETNG	ENSTNIP00000002452	ENSTNIP00000004842	Signal-induced proliferation-associated 1 like 1.	Interferon-related developmental regulator 2.	0.508
H3C2I4_TETNG	H3CLX4_TETNG	ENSTNIP00000002452	ENSTNIP00000009254	Signal-induced proliferation-associated 1 like 1.	Uncharacterized protein.	0.497
H3C2I4_TETNG	H3CNK8_TETNG	ENSTNIP00000002452	ENSTNIP00000009840	Signal-induced proliferation-associated 1 like 1.	Uncharacterized protein.	0.497
H3C2I4_TETNG	H3CZW6_TETNG	ENSTNIP00000002452	ENSTNIP00000013802	Signal-induced proliferation-associated 1 like 1.	Ral GTPase activating protein, beta subunit (non-catalytic).	0.473
H3C2I4_TETNG	H3D4L1_TETNG	ENSTNIP00000002452	ENSTNIP00000015449	Signal-induced proliferation-associated 1 like 1.	RAP1A, member of RAS oncogene family a.	0.497
H3C2I4_TETNG	H3DPV5_TETNG	ENSTNIP00000002452	ENSTNIP00000022554	Signal-induced proliferation-associated 1 like 1.	Pecanex 1.	0.454
H3C2I4_TETNG	LZTS2-2	ENSTNIP00000002452	ENSTNIP00000017443	Signal-induced proliferation-associated 1 like 1.	Leucine zipper putative tumor suppressor 2 homolog; Negative regulator of katanin-mediated microtubule severing and release from the centrosome. Required for central spindle formation and the completion of cytokinesis. Negative regulator of the Wnt signaling pathway. Represses beta-catenin-mediated transcriptional activation by promoting the nuclear exclusion of beta-catenin. Belongs to the LZTS2 family.	0.456
H3C3P5_TETNG	H3C2I4_TETNG	ENSTNIP00000002864	ENSTNIP00000002452	Regulating synaptic membrane exocytosis 1a.	Signal-induced proliferation-associated 1 like 1.	0.504
H3C8Z5_TETNG	H3C2I4_TETNG	ENSTNIP00000004717	ENSTNIP00000002452	Uncharacterized protein.	Signal-induced proliferation-associated 1 like 1.	0.454
H3C9C0_TETNG	H3C2I4_TETNG	ENSTNIP00000004842	ENSTNIP00000002452	Interferon-related developmental regulator 2.	Signal-induced proliferation-associated 1 like 1.	0.508
H3CLX4_TETNG	H3C2I4_TETNG	ENSTNIP00000009254	ENSTNIP00000002452	Uncharacterized protein.	Signal-induced proliferation-associated 1 like 1.	0.497
H3CLX4_TETNG	H3D4L1_TETNG	ENSTNIP00000009254	ENSTNIP00000015449	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.900
H3CNK8_TETNG	H3C2I4_TETNG	ENSTNIP00000009840	ENSTNIP00000002452	Uncharacterized protein.	Signal-induced proliferation-associated 1 like 1.	0.497
H3CZW6_TETNG	H3C2I4_TETNG	ENSTNIP00000013802	ENSTNIP00000002452	Ral GTPase activating protein, beta subunit (non-catalytic).	Signal-induced proliferation-associated 1 like 1.	0.473
H3D4L1_TETNG	H3C2I4_TETNG	ENSTNIP00000015449	ENSTNIP00000002452	RAP1A, member of RAS oncogene family a.	Signal-induced proliferation-associated 1 like 1.	0.497
H3D4L1_TETNG	H3CLX4_TETNG	ENSTNIP00000015449	ENSTNIP00000009254	RAP1A, member of RAS oncogene family a.	Uncharacterized protein.	0.900