STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAV3Vav guanine nucleotide exchange factor 3. (852 aa)    
Predicted Functional Partners:
H3CEB3_TETNG
Growth factor receptor-bound protein 2b.
    
0.819
H3D5R2_TETNG
Rac family small GTPase 1a.
   
 0.708
H3DNA6_TETNG
Uncharacterized protein.
   
 0.708
H3D112_TETNG
GRB2 related adaptor protein 2a.
    
0.642
H3C3E0_TETNG
SH2 domain-containing protein.
   
 0.615
H3CNS0_TETNG
Tyrosine-protein kinase.
   
 0.614
H3CXS7_TETNG
Tyrosine-protein kinase.
   
 0.613
Q4SQY7_TETNG
Chromosome 11 SCAF14528, whole genome shotgun sequence.
   
 0.593
H3D4S9_TETNG
Uncharacterized protein.
   
 0.593
H3CCD6_TETNG
Uncharacterized protein.
   
 0.579
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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