STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C514_TETNGUncharacterized protein. (339 aa)    
Predicted Functional Partners:
H3DIS1_TETNG
Uncharacterized protein.
    
 0.929
H3DG38_TETNG
Lin-9 DREAM MuvB core complex component.
    
 0.513
H3D7K0_TETNG
Lin-54 DREAM MuvB core complex component.
    
 0.483
lin52
Protein lin-52 homolog.
    
 0.482
H3C9B4_TETNG
Mediator complex subunit 23.
    
  0.438
H3DBA2_TETNG
Centromere protein S.
    
 0.437
Q4RVM6_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
    
 0.437
H3DDV6_TETNG
Kringle containing transmembrane protein 1.
    
 0.437
Q4RSY4_TETNG
Chromosome 12 SCAF14999, whole genome shotgun sequence.
    
 0.437
H3DBX5_TETNG
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.436
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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