Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C6V8_TETNGIF rod domain-containing protein; Belongs to the intermediate filament family. (114 aa)    
Predicted Functional Partners:
H3CP14_TETNG
Keratin 4; Belongs to the intermediate filament family.
 
     0.828
H3D6D1_TETNG
BCL2 associated athanogene 3.
    
 0.683
H3CRF0_TETNG
INO80 complex subunit E.
   
  0.566
Q4SDJ7_TETNG
Chromosome 18 SCAF14637, whole genome shotgun sequence.
      
 0.538
H3DQG6_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 0.536
H3CBU8_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 0.514
Q4SCR6_TETNG
Chromosome 7 SCAF14650, whole genome shotgun sequence.
    
 
 0.510
H3CGZ9_TETNG
Keratin 15; Belongs to the intermediate filament family.
  
 0.503
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.503
H3CR91_TETNG
Transglutaminase 1 like 1.
    
 
 0.499
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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