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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C744_TETNGDEK proto-oncogene. (346 aa)    
Predicted Functional Partners:
H3DR39_TETNG
Splicing factor 3b, subunit 1.
   
 
 0.946
H3CQD1_TETNG
MYB binding protein (P160) 1a.
     
 0.929
H3D9K6_TETNG
Bromodomain adjacent to zinc finger domain, 1B.
    
 0.922
H3D8F9_TETNG
DEAD (Asp-Glu-Ala-Asp) box helicase 21.
     
 0.908
H3DK21_TETNG
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.906
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.875
H3D0H5_TETNG
Uncharacterized protein.
    
 
 0.875
H3BVU5_TETNG
Bromo domain-containing protein.
    
 0.702
H3DGI8_TETNG
Excision repair cross-complementation group 6.
    
 0.691
H3DHN3_TETNG
Serine/arginine repetitive matrix 1.
    
 
 0.628
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.