Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C7B5_TETNGHomeobox C11a. (319 aa)    
Predicted Functional Partners:
H3CJ55_TETNG
Heart and neural crest derivatives expressed 2.
    
 
 0.461
H3C3X7_TETNG
Spalt-like transcription factor 3a.
    
 
 0.443
Q4T4U0_TETNG
Chromosome undetermined SCAF9550, whole genome shotgun sequence.
    
 
 0.443
H3CEQ5_TETNG
Uncharacterized protein.
      
 0.432
H3CY98_TETNG
RAB27B, member RAS oncogene family.
      
 0.432
H3C7B8_TETNG
Homeobox D10a.
   
  
 0.420
H3C799_TETNG
Homeobox C4a.
   
 
 0.402
H3CUX2_TETNG
RAB5A, member RAS oncogene family, a.
      
 0.401
H3D274_TETNG
RAB5A, member RAS oncogene family, b.
      
 0.401
H3D2C4_TETNG
RAB5C, member RAS oncogene family.
      
 0.401
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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