Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C7C1_TETNGHomeobox domain-containing protein. (249 aa)    
Predicted Functional Partners:
H3C7A1_TETNG
Homeobox C6a.
   
 
 0.726
H3C7A0_TETNG
Homeobox C5a.
   
 
 0.679
H3C7B3_TETNG
Homeobox B6b.
   
 
 0.612
H3CXK4_TETNG
Homeobox domain-containing protein.
   
 
 0.612
H3C7A5_TETNG
Homeobox D4a.
   
 
 0.598
H3CE35_TETNG
Pre-B-cell leukemia homeobox 2.
    
 0.589
H3CFE8_TETNG
Homeobox domain-containing protein.
    
 0.589
H3CM41_TETNG
Pre-B-cell leukemia homeobox 1b.
    
 0.589
H3DCP8_TETNG
PBC domain-containing protein.
    
 0.589
Q4RHF6_TETNG
Chromosome 3 SCAF15050, whole genome shotgun sequence.
    
 0.589
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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