Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C7C4_TETNGHomeobox A13b. (274 aa)    
Predicted Functional Partners:
H3CWT3_TETNG
Meis homeobox 1 b.
    
 
 0.504
H3DIN3_TETNG
Meis homeobox 2a.
    
 
 0.504
H3CJ55_TETNG
Heart and neural crest derivatives expressed 2.
    
 
 0.407
H3CJM1_TETNG
Transcription factor AP-2 alpha.
    
 
 0.405
TFAP2B
Transcription factor AP-2 beta.
    
 
 0.405
H3D9R3_TETNG
Transcription factor AP-2 beta.
    
 
 0.405
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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