Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRFA22Class I helical cytokine receptor number 22. (631 aa)    
Predicted Functional Partners:
H3CDP7_TETNG
Major facilitator superfamily domain containing 8.
    
 0.853
H3CQV1_TETNG
Si:ch211-38m6.6.
    
 0.853
H3D3Q8_TETNG
MFS domain-containing protein.
    
 0.853
H3D876_TETNG
Kit ligand a.
  
   
 0.672
H3C6Y0_TETNG
TUB like protein 1b; Belongs to the TUB family.
      
 0.579
H3C8V9_TETNG
Tubby-like protein; Belongs to the TUB family.
      
 0.579
H3CVG2_TETNG
Tubby-like protein; Belongs to the TUB family.
      
 0.579
TULP3
Tubby-like protein; Belongs to the TUB family.
      
 0.579
H3BX30_TETNG
SH2B adaptor protein 3.
      
 0.576
H3DM27_TETNG
Neurobeachin-like 2.
      
 0.570
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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