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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C7N3_TETNGSyndecan binding protein (syntenin) 2. (166 aa)    
Predicted Functional Partners:
H3DHV4_TETNG
Programmed cell death 6 interacting protein.
    
 0.755
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
 
 0.670
H3DAM6_TETNG
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.551
H3D4P4_TETNG
Tetraspanin.
   
 0.535
H3CQI9_TETNG
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.523
H3DK48_TETNG
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.522
H3CM13_TETNG
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.511
H3CU11_TETNG
TNF receptor-associated factor 3 interacting protein 1.
    
 0.510
H3CIP1_TETNG
Intraflagellar transport 172.
    
 0.500
H3DE04_TETNG
Intraflagellar transport 88 homolog.
    
 0.485
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.