Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C7X0_TETNGUncharacterized protein. (434 aa)    
Predicted Functional Partners:
H3CIK0_TETNG
DENN/MADD domain containing 4B.
 
     0.734
H3DQW0_TETNG
Uncharacterized protein.
      
 0.504
H3CEA0_TETNG
F-box and leucine-rich repeat protein 4.
      
 0.472
H3CIS7_TETNG
Uncharacterized protein.
    
 
 0.468
H3CQ88_TETNG
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
 0.452
H3BZ63_TETNG
DENN/MADD domain containing 5A.
    
 
 0.438
H3CW31_TETNG
MAP-kinase activating death domain.
    
   0.412
H3CCM1_TETNG
Coiled-coil domain containing 102A.
      
 0.410
H3C9A2_TETNG
Poly [ADP-ribose] polymerase.
   
  
 0.400
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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