STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C814_TETNGInterferon regulatory factor 4a. (418 aa)    
Predicted Functional Partners:
H3C2N1_TETNG
SEFIR domain-containing protein.
      
 0.647
IRF1
Interferon regulatory factor 1b.
  
0.580
H3DEL0_TETNG
Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
      
 0.554
H3CVJ3_TETNG
Spi-1 proto-oncogene b.
   
 
 0.498
H3D5D2_TETNG
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.452
H3CS56_TETNG
Serine/threonine-protein kinase PLK.
   
 0.437
H3DCR5_TETNG
Serine/threonine-protein kinase PLK.
   
 0.437
H3DJP3_TETNG
Serine/threonine-protein kinase PLK.
   
 0.437
CDC25B
Cell division cycle 25B.
   
 0.419
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.