Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3C882_TETNGN-acetyltransferase domain-containing protein. (167 aa)    
Predicted Functional Partners:
Q4RVM5_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence; Belongs to the spermidine/spermine synthase family.
    
 0.937
H3CTP5_TETNG
Amine oxidase.
     
 0.909
H3CG33_TETNG
Spermidine/spermine N1-acetyltransferase 1b.
  
  
 
0.905
Q4TGH1_TETNG
Chromosome undetermined SCAF3711, whole genome shotgun sequence.
  
  
 
0.900
H3CV71_TETNG
Transcription factor 25 (basic helix-loop-helix).
    
   0.800
H3BYA5_TETNG
Spermidine/spermine N1-acetyltransferase family member 2b.
    
   0.644
H3CRG8_TETNG
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
      
 0.508
H3DHM2_TETNG
3-hydroxy-3-methylglutaryl-CoA lyase.
      
 0.461
Q4RFD8_TETNG
Malate dehydrogenase.
     
 0.461
H3C0P7_TETNG
RNA binding motif protein 17.
    
   0.448
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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